` Publications from the Landes Research Group at Rice University


Baiyasi, R., Gallagher, M.J., McCarthy, L.A., Searles, E.K., Zhaing, Q., Link, S., Landes, C.F., "Quantitative Analysis of Nanorod Aggregation and Morphology from Scanning Electron Micrographs Using SEMseg" J. Phys. Chem. A 2020

Dutta, C., Bishop, L.D.C, Zepeda O, J., Chatterjee, S., Flatebo, C., Landes, C.F., "Imaging Switchable Protien Interactions With an Active Porous Polymer Support" J. Phys. Chem. B 2020, 124, 22, 4412-4420.

Ostovar, B., Su, M.N., Renard, D., Clark, B.D., Dongare, P.D., Dutta, C., Gross, N., Sader, J.E., Landes, C.F., Chang, W-S, Halas, N.J., Link, S., "Acoustic Vibrations of Al Nanocrystals: Size, Shape, and Crystallinity Revealed by Single-Particle Transient Extinction Spectroscopy" J. Phys. Chem. A 2020, 124, 19, 3924-3934.

Warning, L.A., Zhang, Q., Baiyasi, R., Landes, C.F., Link, S., "Nanoscale Surface-induced Unfolding of Single Fibronectin is Restricted by Serum Albumin Crowding" JPCL 2020, 11, 3, 1170-1177.

Moringo, N.A., Bishop, L.D.C., Shen, H., Misiura, A., Carrejo, N.C., Baiyasi, R., Wang, W., Ye, F., Robinson, J.T., Landes C.F., "A mechanistic examination of salting out in protein-polymer membrane interactions" PNAS 2019, 116(46) 22938-22945.

Zhang, Q., Hernandez, T., Smith, K.W., Jebeli, S.A.H., Dai, A.X., Warning, L., Baiyasi, R., McCarthy, L.A., Guo, H., Chen, D-H, Dionne, J.A., Landes C.F., Link, S., "Unraveling the origin of chirality from plasmonic nanoparticle-protein complexes" Science 2019, 365, 6460, 1475-1478.

Cai, Y., Collins, S.S.E., Gallagher, M.J., Bhattacharjee, U., Zhang, R., Chow, T.H., Ahmadivand, A., Ostovar, B., Al-Zubeidi, A., Wnag, Jianfang, Nordlander, P., Landes, C.F., Link, S., "Single Particle emission spectroscopy resolves d-hole relaxation in copper nanocubes" ACS Energy lett. 2019, 4, 10, 2458-2465.

Heiderscheit, T.S., Gallagher, M.J., Baiyasi, R., Collins, S.S.E., Jebeli, S.A.H., Scarabelli, L., Zl-Zubeidi, A., Flatebo, C., Chang, W-S., Landes, C.F., Link, S., "Nanoelectrode-emitter spectral overlap amplifies surface enhanced electrogenerated chemiluminescence" J. Chem. Phys. 151, 144712 (2019)

Flatebo, C., Collins, S.S.E., Hoener, B.S., Cai, Y-Y., Link, S., Landes, C.F., "Electrodissolution Inhibition of Gold Nanorods with Oxoanions" J. Phys. Chem. C, 2019

Baiyasi, R, Jebeli, S.A.H., Zhang, Q., Su, L.,Hofkens, J., Uji-i, H., Link, S., Landes, C.F., "PSF Distortion in Dye-Plasmonic Nanomaterial Interactions: Friend or Foe?" ACS Photonics 2019, 6(3), pp. 699-708

Wang, W., Ye, F., Shen, H., Moringo, N.A., Dutta, C., Robinson, J.T., Landes, C.F., "Generalized method to design phase masks for 3D super-resolution microscopy" Opt. Express 2019, 27(3), pp. 3799-3816

Chatterjee, S., A., Carina, Nurik, C.E., Carrejo, N.C., Dutta, C., Jayaraman, V., Landes, C.F., "Phosphorylation Induces Conformational Rigidity at the C-Terminal Domain of AMPA Receptors" J. Phys. Chem. B 2019

Al-Zubeidi, A., Hoener, B.S., Collins, S.S.E., Wang, W., Kirchner, S.R., Jebeli, S.A.H, Joplin, A., Chang, W-S., Link, S., Landes, C.F., "Hot Holes Assist Plasmonic Nanoelectrode Dissolution" Nano Lett. 2019

Hoener, B.S., Kirchner, S.R., Heiderscheit, T.S., Collins, S.S.E., Chang, W., Link, S., Landes, C.F., "Plasmonic Sensing and Control of Single-Nanoparticle Electrochemistry" Chem. 2018, 4:7, 1560-1585

Moringo, N.A., Shen, H., Bishop, L.D.C., Wang, W., Landes, C.F., "Enhancing Analytical Separations Using Super-Resolution Microscopy" Annu. Rev. Phys. Chem. 2018, 69:14, 1-14.23

Dolino, D.M., Chatterjee, S., MacLean, D.M., Flatebo, C., Bishop, L.D.C., Shaikh, S.A., Landes, C.F., Jayaraman, V., "The structure–energy landscape of NMDA receptor gating" Nat. Chem. Bio., 2017, 13, pp. 1232-1238

Kisley, L., Ujwal, P., Dhamane, S., Kourentzi, K., Tauzin, L.J., Wilson, R.C., Landes, C.F., "Competitive multicomponent anion exchange adsorption of proteins at the single molecule level" Analyst, 2017, 17(142), pp 3127-3131

Moringo, N.A., Shen, H., Tauzin, L.J., Wang, W., Bishop, L.D.C., Landes, C.F., "Variable Lysozyme Transport Dynamics on Oxidatively Functionalized Polystyrene Films" Langmuir, 2017, 33(41), pp 10818-10828

Hoener, B. S., Zhang, H., Heiderscheit, T.S., Kirchmer, S.R., Indrasekara, A.S.D.S., Baiyasi, R., Cai, Y., Nordlander, P., Link, S., Landes, C. F., and Chang, W., "Spectral Response of Plasmonic Gold Nanoparticles to Capacitive Charging: Morphology Effects" J. Phys Chem Lett., 2017, 8 (12), pp 2681–2688

Shen, H, Tauzin, L, Baiyasi, R, Wang, W, Moringo, N, Shuang, B, and Landes, C. F, "Single Particle Tracking: From Theory to Biophysical Applications" Chem. Rev., 2017 117 (11), pp 7331–7376

Indrasekara, A.S.D.S., Shuang, B., Hollenhorst, F., Hoener, B.S., Hoggard, A., Chen, S., Villarreal, E., Cai, Y., Kisley L., Derry, P. J., Chang, W., Zubarev, E. R., Ringe, E., Link, S., and Landes, C. F., "Optimization of Spectral and Spatial Conditions to Improve Super-Resolution Imaging of Plasmonic Nanoparticles" J. Phys. Chem. Lett, 2017 8 (1), pp 299–306

Hoener, B.S.; Byers, C.P.; Indrasekara, S.; Hoggard, A.; Chang, W.S.; Link, S.; Landes, C. F., "Spectroelectrochemistry of Halide Anion Adsorption and Dissolution of Single Gold Nanorods" J. Phys. Chem. C, 2016, 120 (37), pp 20604–20612

Shaikh, S.; Dolino, D.M.; Lee, G.; Chatterjee, S.; MacLean, D.M.; Flatebo, C.; Landes, C.F.; Jayaraman, V., "Stargazin Modulcation of AMPA Receptors" Cell Rep. 2016, 17:2, 328-335

Wang, W, Shen, H, Shuang, B, Hoener, B. S., Tauzin, L. J., Moringo, N. A., Kelly, K. F., and Landes, C. F, "Super Temporal-Resolved Microscopy (STReM)" J. Phys Chem Lett. 2016 7 (22), pp 4524-4529

Shuang, B., Wang, W., Shen, H., Tauzin, L. J. Flatebo, C., Chen, J., Moringo, N. A., Bishop, L. D. C., Kelly, K. F., Landes, C. F. , "Generalized recovery algorithm for 3D super-resolution microscopy using rotating point spread functions" Scientific Reports, 2016, 6: 30826

Shen, H. Tauzin, L. J., Wang, W., Hoener, B.S., Shuang, B., Kisley L., Hoggard, A., Landes, C. F,, "Single-Molecule Kinetics of Protein Adsorption on Thin Nylon-6,6 Films" Anal. Chem., 2016, 88 (20), pp 9926–9933

Byers, C.P.; Hoener, B.S.; Chang, W.S.; Link, S.; Landes, C. F., "Single-Particle Plasmon Voltammetry (spPV) for Detecting Anion Adsorption" Nano Lett., 2016, 16 (4), pp 2314–2321

Tauzin, L.J; Shen, H.; Bothof, C.A.; Griesgraber, G.W.; McNulty, A.K.; Rasmussen, J.K.; Landes, C.F., "Variable surface transport modalities on functionalized nylon films revealed with single molecule spectroscopy" RSC Advances 2016, 6, 27760-27766.

Dominguez-Medina, S.; Kisley, L.; Tauzin, L.J.; Hoggard, A.; Shuang, B.; Indrasekara, A.S.D.S.; Wang, L.-Y.; Chen, S.; Derry, P.J.; Liopo, A.; Zubarev, E.R.; Landes, C. F.; Link, S., "Adsorption and Unfolding of a Single Protein Triggers Nanoparticle Aggregation" ACS Nano 2016, 10, 2103-2112.

Poongavanam, M. -V.; Kisley, L.; Kourentzi, K.; Willson, R.C.; Landes, C. F., "Ensemble and single-molecule biophysical characterization of D17.4 DNA aptamer–IgE interactions" BBA Proteins Proteom. 2016, 1864, 154-164.

Dominguez-Medina, S.; Chen, S.; Blankenburg, J.; Swanglap, P.; Landes, C. F.; Link, S, "Measuring the Hydrodynamic Size of Nanoparticles Using Fluctuation Correlation Spectroscopy" Ann. Rev. Phys. Chem. 2016, 67.

Byers, C. P.; Zhang, H.; Swearer, D. F.; Yorulmaz, M.; Hoener, B. S.; Huang, D.; Hoggard, A.; Chang, W.-S.; Mulvaney, P.; Ringe, E.; Halas, N. J.; Nordlander, P.; Link, S.; Landes, C.F., "From tunable core-shell nanoparticles to plasmonic drawbridges: Active control of nanoparticle optical properties" Science Advances, 2015, 1, 11

Kisley, L.; Poongavanam, M. -V.; Kourentzi, K.; Willson, R.C.; Landes, C. F., "pH-dependence of single-protein adsorption and diffusion at a liquid chromatographic interface" J. Sep. Sci. 2015, 00, 1-7.

Kisley, L.; Brunetti, R.; Tauzin, L. J.; Shuang, B.; Yi, X.; Kirkeminde, A. W.; Higgins, D. A.; Weiss, S; Landes, C.F., "Characterization of Porous Materials by Fluorescence Correlation Spectroscopy Super-resolution Optical Fluctuation Imaging" ACS Nano, 2015, 9, 9158–9166.

Taylor, J. N.; Li, C. B.; Cooper, D. R.; Landes, C. F.; Komatsuzaki, T., "Error-based Extraction of States and Energy Landscapes from Experimental Single-Molecule Time-Series" Sci. Rep. 2015, 5, 9174.

Cooper, D.; Dolino, D.; Jaurich, H.; Shuang, B.; Ramaswamy, S.; Nurik, C.E.; Chen, J.; Jayaraman, V.; Landes, C. F., "Conformational Transitions in the Glycine-Bound GluN1 NMDA Receptor LBD via Single-Molecule FRET" Biophys.J, 2015, 109, 66 - 75

Dolino, D.; Cooper, D.; Ramaswamy, S.; Henriette Jaurich, H.; Landes, C. F.; Jayaraman, V. , "Structural Dynamics of the Glycine-binding Domain of the N-Methyl-D-Aspartate Receptor" J. Biol. Chem., 2015, 290, 797-804.

Landes, C.F.; Link. S.; Wine, P.H.; Zhang, Z.J., "2013 Southeastern Regional ACS Meeting. Nanochemistry and Spectroscopy: Symposium Honoring Mostafa El-Sayed" J. Phys. Chem. C. 2014. 14009-14009.

Chen, J; Poddar, N. K.; Tauzin, L. J.; Cooper, D.; Kolomeisky, A. B.; Landes, C. F., "Single-Molecule FRET Studies of HIV TAR–DNA Hairpin Unfolding Dynamics" JACS, 2014, 136 (45), 16023–16031

Hu, Z.; Adachi, T.; Haws, R.T.; Shuang, B.; Ono, R.J.; Bielawski, C.W.; Landes, C.F.; Rossky, P.J.; Vanden Bout, D.A., "Excitonic Energy Migration in Conjugated Polymers: The Critical Role of Interchain Morphology" J. Phys. Chem. B, 2014, 118(42),12130–12139

Shuang, B.; Cooper, D.; Taylor, J. N.; Kisley, L.; Chen, J.; Wang, W.; Li, C. B.; Komatsuzaki, T.; Landes, C. F., "Fast Step Transition and State Identification (STaSI) for Discrete Single-Molecule Data Analysis" J. Phys Chem Lett., 2014, 5 (18), 3157-3161

Byers, C. P.; Hoener, B. S.; Chang, W.S.; Yorulmaz, M.; Link, S.; Landes, C. F., "Single-Particle Spectroscopy Reveals Heterogeneity in Electrochemical Tuning of the Localized Surface Plasmon" J. Phys. Chem. B, 2014, 118 (49), pp 14047–14055

Tauzin, L. J.; Shuang, B.; Kisley, L. M.; Mansur, A. P.; Chen, J.; Leon, A.; Advincula, R. C.; Landes, C. F., "Charge-Dependent Transport Switching of Single Molecular Ions in a Weak Polyelectrolyte Multilayer" Langmuir, 2014, 30, 8391-8399

Kisley, L.; Chen, J.; Mansur, A. P.; Dominguez-Medina, S.; Kulla, E.; Kang, M.; Shuang, B.; Kourentzi, K.; Poongavanam, M. -V.; Dhamane, S.; Willson, R.C.; Landes, C. F., "High ionic strength narrows the population of sites participating in protein ion-exchange adsorption: A single-molecule study" J. Chromatogr. A., 2014, 1343, 135-142.

Kisley, L.; Chen, J.; Mansur, A. P.; Shuang, B.; Kourentzi, K.; Poongavanam, M. -V.; Chen, W. -H.; Dhamane, S.; Willson, R.C.; Landes, C. F., "Unified superresolution experiments and stochastic theory provide mechanistic insight into protein ion-exchange adsorptive separations" Proc. Natl. Acad. Sci., 2014, 111, 2075-2080.

Chen, J.; Bremauntz, A.; Kisley, L.; Shuang, B.; Landes, C. F., "Super-Resolution mbPAINT for Optical Localization of Single-Stranded DNA" ACS Appl. Mater. Interfaces, 2013, 5, 9338-9343.

Dominguez-Medina, S., Blankenburg, J., Olson, J., Landes, C. F., Link, S., "Adsorption of a Protein Monolayer via Hydrophobic Interactions Prevents Nanoparticle Aggregation under Harsh Environmental Conditions" ACS Sustainable Chemistry & Engineering, 2013, 1(7), 833-842.

Kawai, S.; Cooper, D.; Landes, C. F.; Mootz, H.D.; Yang, H.; Komatsuzaki, T., "Numerical Construction of Estimators for Single-Molecule Fluorescence Measurements" J. Phys. Chem. B, 2013, 117(27), 8061–8074.

Kisley, L.; Chang, W. -S.; Cooper, D.; Mansur, A. P.; Landes, C. F., "Extending single molecule fluorescence observation time by amplitude-modulated excitation" Methods Appl. Fluoresc., 2013, 1, 037001.

Shuang, B.; Byers, C.P.; Kisley, L.; Wang, L. Y.; Zhao, J.; Morimura, H.; Link, S.; Landes, C. F., "Improved Analysis for Determining Diffusion Coefficients from Short, Single-Molecule Trajectories with Photoblinking" Langmuir, 2013,29(1), 228-234.

Daniels C. R.; Tauzin L. J.; Foster E.; Advincula R. C.; Landes, C. F., "On the pH-Responsive, Charge-Selective, Polymer-Brush-Mediated Transport Probed by Traditional and Scanning Fluorescence Correlation Spectroscopy" J. Phys. Chem. B,2013, 117(16), 4284–4290.

Ramaswamy, S.; Cooper, D; Poddar, N.; Rambhadran, A.; Taylor, J. N.; Uhm, H.; Landes, C.F.; Jayaraman, V., "Role of Conformational Dynamics in α-Amino-3-hydroxy-5-methylisoxazole-4-propionic Acid (AMPA) Receptor Partial Agonism" J. Biol. Chem., 2012, 287, 43557-43564.

Dominguez-Medina, S.; McDonough, S.; Swanglap, P.; Landes, C. F.; Link, S., "In Situ Measurement of Bovine Serum Albumin Interaction with Gold Nanospheres" Langmuir, 2012, 28 (24), 9131-9139

Reznik, C.; Landes, C. F., "Transport in Supported Polyelectrolyte Brushes" Acc. Chem. Res., 2012, 45, 1927-1935.

Daniels, C.; Kisley, L.; Kim, H.; Chen, W.; Vivek, M.; Reznik, C.; Kourentzi, K.; Willson, R.C.; Landes, C.F., "Fluorescence correlation spectroscopy study of protein transport and dynamic interactions with clustered‐charge peptide adsorbents" J. Molecular Recognition, 2012 25, 435-442.

Reznik, C.; Berg, R.; Foster, E.; Advincula, R.; Landes, C.F., "Transient Three-Dimensional Orientation of Molecular Ions in an Ordered Polyelectrolyte Membrane" J. Phys. Chem. Lett., 2011 2 (6), 592-598.

Tcherniak, A.; Dominguez-Medina, S.; Chang, W.S.; Swanglap, P.; Slaughter, L.S.; Landes, C.F.; Link, S., "One-Photon Plasmon Luminescence and Its Application to Correlation Spectroscopy as a Probe for Rotational and Translational Dynamics of Gold Nanorods" J. Phys. Chem. B, 2011, 115, 15938-15949.

Daniels, C.R.; Reznik, C.; Kilmer, R.; Felipe, M.J.; Tria, M.C.R.; Kourentzi, K.; Willson, R.C.; Advincula, R.C.; Landes, C.F., "Permeability of anti-fouling PEGylated surfaces probed by fluorescence correlation spectroscopy" Colloids and Surfaces, 2011, 88, 31-38.

Landes, C.F.; Rambhadran, A; Taylor, J. N.; Salatan, F.; Jayaraman, V., "Structural landscape of isolated agonist-binding domains from single AMPA receptors" Nat. Chem. Bio., 2011,7, 168-173

Daniels, C.R.; Reznik, C.; Landes, C.F., "Dye Diffusion at Surfaces: Charge Matters" Langmuir, 2010, 26 (7), 4807–4812.

Taylor, J. N.; Makarov, D.E.; Landes, C.F., "Denoising Single-Molecule FRET Trajectories with Wavelets and Bayesian Inference" Biophys. J., 2010, 98, 164-173.

Tcherniak, A.; Reznik, C.; Link, S.; Landes, C.F., "Fluorescence Correlation Spectroscopy: Criteria for Analysis in Complex Systems" Anal. Chem., 2009, 81, 746-754.

Taylor, J.N.; Darugar, Q; Kourentzi, K.; Willson, R. C.; Landes, C.F., "Dynamics of an anti-VEGF DNA aptamer: A single-molecule study" BBRC, 2008, 373, 213-218.

Reznik, C.; Darugar, Q.; Wheat, A.; Fulghum, T.; Advincula, R.C.;Landes, C.F., "Single Ion Diffusive Transport within a Poly(styrene sulfonate) Polymer Brush Matrix Probed by Fluorescence Correlation Spectroscopy" J. Phys. Chem. B (cover article), 2008, 112(35), 10890-10897.